k-mer
  TnD0WQEygW8e 2023年11月08日 66 0

The term k-mer (or x-mer where x can be virtually any consonant of choice) usually refers to a specific n-tuple or n-gram of nucleic acid or amino acid sequences that can be used to identify certain regions within biomolecules like DNA (e.g. for gene prediction) or proteins. Either k-mer strings as such can be used for finding regions of interest, or k-mer statistics giving discrete probability distributions of a number of possible k-mer combinations (or rather permutations with repetitions) are used. Specific short k-mers are called oligomers or "oligos" for short.

  • Dimer = AGAGAGAGAGAGAG
  • Trimer = AAGAAGAAGAAG

 

http://en.wikipedia.org/wiki/K-mer



【版权声明】本文内容来自摩杜云社区用户原创、第三方投稿、转载,内容版权归原作者所有。本网站的目的在于传递更多信息,不拥有版权,亦不承担相应法律责任。如果您发现本社区中有涉嫌抄袭的内容,欢迎发送邮件进行举报,并提供相关证据,一经查实,本社区将立刻删除涉嫌侵权内容,举报邮箱: cloudbbs@moduyun.com

  1. 分享:
最后一次编辑于 2023年11月08日 0

暂无评论

推荐阅读
TnD0WQEygW8e